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SIRAH Force field for amino acids, solvent and nucleotides
A Coarse Grained Model for Atomic-Detailed DNA Simulations with Explicit Electrostatics
Mixing Atomistic and Coarse Grain Solvation Models for MD Simulations: Let WT4 Handle the Bulk
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SIRAH lipids are ready to taste!
We just submitted a manuscript reporting the development of parameters for phospholipids. Membrane proteins simulations are remarkably acc...
Contact Us
Sergio Pantano Group of BioMolecular Simulations Institut Pasteur de Montevideo E mail: spantano@pasteur.edu.uy Address: Mataojo 2020,...
New CG trajectories of SARS-CoV2 available
All CG simulations of SARS-CoV2 proteins and complexes are accessible from the web page of ClusterUy So far the following PDB structures...
SIRAH Force field for amino acids, solvent and nucleotides
Coarse-grain (CG) techniques applied to molecular simulations allow for a considerable extension of the accessible size and time scale...
SIRAH forcefield in GROMACS
Tutorial 1 Simulation of a coarse grained DNA molecule in explicit solvent Tutorial 2 Hybrid solvation: Plugging S...
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